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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
44
total RNA-seq
18
small RNA-seq
8
WGBS
6
ATAC-seq
4
Hi-C
2
FAIRE-seq
Assay category
62
Transcription
8
DNA accessibility
8
DNA methylation
4
3D chromatin structure
Target of assay
control
Date released
551
February, 2021
318
November, 2017
300
May, 2021
271
August, 2017
260
May, 2020
210
June, 2019
207
October, 2019
164
July, 2018
97
May, 2019
82
July, 2019
80
November, 2018
72
December, 2017
72
September, 2018
65
April, 2019
49
April, 2018
47
August, 2021
47
October, 2018
40
May, 2024
31
February, 2018
31
November, 2019
30
December, 2018
26
January, 2019
20
March, 2020
20
May, 2022
14
October, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
November, 2020
5
September, 2017
August, 2018
3
February, 2023
3
June, 2018
3
September, 2020
Available data
82
bigWig
79
bam
62
tsv
23
bed bedMethyl
23
bigBed bedMethyl
7
bed narrowPeak
4
bed bed3+
4
hdf5
2
bigBed narrowPeak
Organism
82
Homo sapiens
Biosample type
63
tissue
19
primary cell
Organ
21
heart
17
connective tissue
13
brain
12
adipose tissue
10
blood vessel
10
vasculature
8
liver
7
epithelium
7
kidney
5
musculature of body
4
pancreas
3
artery
1
limb
1
pericardium
Project
82
AMP
Genome assembly (visualization)
76
GRCh38
73
hg19
Lab
82
AMP-T2D consortium
month_released!
August, 2018
target.investigated_as!
control
BIOSAMPLE
ASSAY
82 results
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total RNA-seq
small RNA-seq
WGBS
ATAC-seq
Hi-C
FAIRE-seq
tissue
heart left ventricle
2
2
2
omental fat pad
4
1
subcutaneous adipose tissue
4
1
body of pancreas
2
2
heart
2
1
1
+ See 21 more…
primary cell
mesenchymal stem cell of adipose
1
1
skeletal muscle satellite cell
1
1
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
+ See 12 more…
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