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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
92
total RNA-seq
85
single cell RNA-seq
48
snATAC-seq
47
WGBS
42
ATAC-seq
Assay category
177
Transcription
90
DNA accessibility
47
DNA methylation
3D chromatin structure
Date released
134
May, 2022
76
February, 2023
59
September, 2020
45
February, 2021
August, 2020
Available data
162
fastq
153
zippedFastqFolder
6
tsv
3
bigWig
Organism
314
Homo sapiens
Biosample type
314
primary cell
Organ
142
epithelium
142
pancreas
Project
4222
AMP
314
HPAP
244
T1D
47
KPMP
19
LungMap
4
community
Genome assembly (visualization)
3
GRCh38
Lab
314
Klaus Kaestner, Upenn
Audit category:
27
audit script error
month_released!
August, 2020
assay_slims!
3D chromatin structure
BIOSAMPLE
ASSAY
314 results
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total RNA-seq
single cell RNA-seq
snATAC-seq
WGBS
ATAC-seq
primary cell
Langerhans cell
85
48
pancreatic alpha cell
42
31
24
pancreatic beta cell
11
16
14
exocrine cell
39
pancreatic acinar cell
4
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