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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
187
DNase-seq
26
total RNA-seq
14
ATAC-seq
1
single cell RNA-seq
Assay category
201
DNA accessibility
DNA binding
27
Transcription
Date released
707
February, 2021
291
May, 2020
276
August, 2021
234
May, 2021
205
February, 2023
200
May, 2022
187
June, 2019
168
July, 2018
115
August, 2017
108
July, 2019
72
October, 2019
61
March, 2020
59
September, 2020
49
April, 2018
48
November, 2019
47
September, 2023
41
September, 2018
25
February, 2020
19
April, 2020
18
November, 2018
16
January, 2021
16
November, 2020
15
February, 2018
15
May, 2023
10
December, 2019
8
January, 2018
8
October, 2017
August, 2020
5
January, 2019
5
March, 2019
5
March, 2023
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
2
October, 2018
1
August, 2022
1
December, 2018
Available data
227
bam
227
bigWig
201
bed narrowPeak
201
bigBed narrowPeak
187
bed bed3+
187
bed broadPeak
187
bigBed broadPeak
41
fastq
26
tsv
1
csv
Organism
228
Homo sapiens
Biosample type
163
tissue
65
primary cell
Organ
78
kidney
54
epithelium
44
pancreas
33
musculature of body
32
limb
30
brain
30
heart
18
ureter
7
vasculature
6
connective tissue
5
blood vessel
4
eye
2
artery
2
liver
1
adipose tissue
Project
228
AMP
Genome assembly (visualization)
227
GRCh38
204
hg19
Lab
228
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
month_released!
August, 2020
assay_slims!
DNA binding
BIOSAMPLE
ASSAY
228 results
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Clear Filters
DNase-seq
total RNA-seq
ATAC-seq
single cell RNA-seq
tissue
heart
18
muscle of arm
17
kidney
13
muscle of leg
13
brain
12
+ See 34 more…
primary cell
pancreatic beta cell
10
4
pancreatic alpha cell
10
3
pancreatic ductal cell
4
4
pancreatic acinar cell
2
3
cardiac fibroblast
3
+ See 20 more…
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