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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
ATAC-seq
4
DNase-seq
Assay category
47
DNA binding
16
DNA accessibility
Date released
7
November, 2019
4
June, 2019
4
October, 2019
1
February, 2023
Available data
19
bam
16
bed narrowPeak
11
bigWig
7
tsv
6
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
4
bigBed narrowPeak
1
bed bedgraph
1
txt
Organism
16
Homo sapiens
Biosample type
8
in vitro differentiated cells
5
primary cell
2
tissue
1
cell line
Organ
3
epithelium
2
connective tissue
1
adipose tissue
1
heart
1
kidney
1
limb
1
liver
1
musculature of body
1
pancreas
1
vasculature
Project
16
AMP
Genome assembly (visualization)
16
hg19
15
GRCh38
Lab
15
AMP-T2D consortium
1
Struan F.A. Grant, CHOP
Audit category:
16
inconsistent ontology term
1
inconsistent replicate
month_released!
August, 2020
BIOSAMPLE
ASSAY
16 results
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ATAC-seq
DNase-seq
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
cardiac precursors (cardiac muscle cell)
1
cardiomyocytes (cardiac muscle cell)
1
neuron cell of Hypothalamus (neuron)
1
primary cell
Heart fetal (cardiac muscle cell)
1
Liver fetal (hepatocyte)
1
cardiac fibroblast
1
epithelial cell of proximal tubule
1
smooth muscle cell of the brain vasculature
1
tissue
adipose tissue(adipose white tissue)
1
muscle of leg
1
cell line
EndoC_BH1
1
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