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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
92
total RNA-seq
73
single cell RNA-seq
42
ATAC-seq
41
WGBS
21
snATAC-seq
3
Hi-C
Assay category
165
Transcription
63
DNA accessibility
41
DNA methylation
3
3D chromatin structure
Date released
134
May, 2022
76
February, 2023
59
September, 2020
February, 2021
August, 2020
3
October, 2022
Available data
153
zippedFastqFolder
117
fastq
3
bedpe bed3+
3
bigWig
3
cool
3
hic
Organism
272
Homo sapiens
Biosample type
272
primary cell
Organ
139
epithelium
139
pancreas
Project
3582
AMP
272
HPAP
244
T1D
47
KPMP
19
LungMap
4
community
1
ITG
Genome assembly (visualization)
3
GRCh38
3
hg19
Lab
272
Klaus Kaestner, Upenn
Audit category:
3
audit script error
month_released!
August, 2020
February, 2021
BIOSAMPLE
ASSAY
272 results
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total RNA-seq
single cell RNA-seq
ATAC-seq
WGBS
snATAC-seq
Hi-C
primary cell
Langerhans cell
73
21
pancreatic alpha cell
42
24
25
1
pancreatic beta cell
11
14
16
1
exocrine cell
39
pancreatic acinar cell
4
1
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