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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
total RNA-seq
37
ChIP-seq
5
ATAC-seq
Assay category
84
Transcription
37
DNA binding
5
DNA accessibility
Target of assay
21
histone
21
histone modification
16
transcription factor
11
narrow histone mark
10
broad histone mark
control
5
RNA binding protein
Date released
126
May, 2021
60
August, 2017
35
August, 2021
35
December, 2017
31
February, 2018
26
February, 2021
16
February, 2023
8
March, 2020
8
October, 2019
5
November, 2019
4
January, 2018
2
December, 2019
1
August, 2018
Available data
89
bigWig
84
bam
79
tsv
5
bed narrowPeak
5
tagAlign
Organism
126
Homo sapiens
Biosample type
203
primary cell
126
in vitro differentiated cells
40
tissue
21
cell line
Organ
4
epithelium
2
embryo
2
pancreas
1
connective tissue
1
heart
Project
126
AMP
Genome assembly (visualization)
89
hg19
84
GRCh38
Lab
84
AMP-T2D consortium
42
Kyle Gaulton, UCSD
Audit category:
68
inconsistent ontology term
month_released!
August, 2020
target.investigated_as!
control
BIOSAMPLE
ASSAY
126 results
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total RNA-seq
ChIP-seq
ATAC-seq
in vitro differentiated cells
cardiomyocytes
59
3
embryonic stem cell
5
32
5
induced pluripotent stem cell
9
pancreatic PP cell
2
cardiac fibroblast
1
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