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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
303
ChIP-seq
Assay category
303
DNA binding
Target of assay
628
histone modification
627
histone
324
narrow histone mark
303
broad histone mark
187
control
94
transcription factor
28
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
2
nucleotide modification
Date released
73
August, 2017
56
May, 2019
42
November, 2017
39
October, 2019
37
April, 2019
20
May, 2024
19
October, 2018
10
October, 2017
4
January, 2019
3
December, 2017
Available data
253
bed narrowPeak
253
bigWig
222
bam
204
bigBed narrowPeak
76
tagAlign
45
fastq
20
bed broadPeak
6
bed bed3+
Organism
299
Homo sapiens
Biosample type
303
tissue
122
primary cell
56
in vitro differentiated cells
19
cell line
stem cell
Organ
70
brain
57
heart
41
pancreas
36
blood vessel
36
vasculature
34
limb
25
liver
20
adipose tissue
20
connective tissue
16
musculature of body
16
nerve
14
artery
10
kidney
4
spleen
Project
303
AMP
Genome assembly (visualization)
242
GRCh38
198
hg19
Lab
283
AMP-T2D consortium
20
Patrick T. Ellinor, Broad
Audit category:
4
missing controlled_by
Audit category:
3
inconsistent control read length
1
inconsistent assembly
month_released!
August, 2020
biosample_type!
stem cell
BIOSAMPLE
ASSAY
303 results
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ChIP-seq
tissue
liver
22
left cardiac atrium
20
subcutaneous abdominal adipose tissue
20
tibial nerve
16
heart left ventricle
15
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