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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
163
DNase-seq
79
ATAC-seq
13
total RNA-seq
2
snATAC-seq
1
single cell RNA-seq
Assay category
244
DNA accessibility
14
Transcription
Date released
545
February, 2021
284
August, 2017
242
October, 2019
229
August, 2021
193
May, 2020
163
June, 2019
120
July, 2018
115
May, 2019
95
February, 2023
82
November, 2017
80
April, 2019
77
July, 2019
74
October, 2018
66
May, 2022
48
December, 2017
47
September, 2023
40
March, 2020
40
May, 2021
40
May, 2024
40
November, 2019
26
November, 2018
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
Available data
226
bed narrowPeak
163
bam
163
bed bed3+
163
bed broadPeak
163
bigBed broadPeak
163
bigBed narrowPeak
163
bigWig
5
bed bed3
4
tsv
4
txt
Organism
258
Homo sapiens
Biosample type
258
tissue
143
primary cell
16
in vitro differentiated cells
6
cell line
Organ
68
kidney
63
heart
38
blood vessel
38
vasculature
37
artery
34
eye
32
limb
32
musculature of body
26
brain
22
pancreas
18
ureter
14
epithelium
8
bone element
8
skeleton
2
adipose tissue
2
connective tissue
Project
240
AMP
18
T1D
Genome assembly (visualization)
198
GRCh38
180
hg19
Lab
240
AMP-T2D consortium
18
Kyle Gaulton, UCSD
Audit category:
1
inconsistent ontology term
month_released!
August, 2020
BIOSAMPLE
ASSAY
258 results
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DNase-seq
ATAC-seq
total RNA-seq
snATAC-seq
single cell RNA-seq
tissue
coronary artery
2
35
retina
3
15
2
heart
18
1
islet of Langerhans
11
5
2
muscle of arm
17
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