Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
35
ATAC-seq
23
ChIP-seq
3
total RNA-seq
2
WGBS
1
DNase-seq
1
pCHi-C
Assay category
36
DNA accessibility
23
DNA binding
3
Transcription
2
DNA methylation
Target of assay
20
control
3
histone
3
histone modification
2
broad histone mark
1
narrow histone mark
Date released
35
February, 2023
11
May, 2019
10
October, 2019
August, 2021
3
February, 2020
2
February, 2021
2
July, 2019
1
June, 2019
1
March, 2020
Available data
36
bed narrowPeak
26
bam
4
tsv
2
bigWig
2
tagAlign
1
bed bed3+
1
bed bedMethyl
1
bed broadPeak
1
bigBed bedMethyl
1
bigBed broadPeak
1
bigBed narrowPeak
Organism
65
Homo sapiens
Biosample type
57
tissue
6
primary cell
2
cell line
Organ
277
pancreas
203
epithelium
149
liver
122
brain
113
heart
96
kidney
94
connective tissue
89
bone element
65
blood vessel
65
vasculature
64
adipose tissue
46
artery
27
eye
26
limb
23
musculature of body
20
lung
14
blood
14
bodily fluid
12
nerve
11
spleen
8
embryo
5
gonad
5
ovary
5
vein
4
skeleton
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
65
AMP
Genome assembly (visualization)
187
GRCh38
hg19
Lab
65
AMP-T2D consortium
month_released!
August, 2020
August, 2021
assembly!
hg19
BIOSAMPLE
ASSAY
65 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
ChIP-seq
total RNA-seq
WGBS
DNase-seq
pCHi-C
tissue
coronary artery
35
2
1
tibial artery
5
1
aorta
2
2
1
ascending aorta
3
1
thoracic aorta
4
primary cell
endothelial cell of umbilical vein
5
kidney capillary endothelial cell
1
cell line
smooth muscle cell of the coronary artery
2
Download