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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
53
total RNA-seq
47
WGBS
42
ATAC-seq
3
Hi-C
Assay category
53
Transcription
47
DNA methylation
42
DNA accessibility
3
3D chromatin structure
Date released
80
May, 2022
37
February, 2023
19
September, 2020
August, 2020
6
February, 2021
3
October, 2022
Available data
80
zippedFastqFolder
62
fastq
6
tsv
3
bedpe bed3+
3
bigWig
3
cool
3
hic
Organism
145
Homo sapiens
Biosample type
145
primary cell
Organ
145
epithelium
145
pancreas
Project
145
HPAP
Genome assembly (visualization)
3
GRCh38
3
hg19
Lab
366
AMP-T2D consortium
145
Klaus Kaestner, Upenn
6
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
3
audit script error
month_released!
August, 2020
organ_slims!
adipose tissue
BIOSAMPLE
ASSAY
145 results
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total RNA-seq
WGBS
ATAC-seq
Hi-C
primary cell
pancreatic alpha cell
42
31
24
1
pancreatic beta cell
11
16
14
1
pancreatic acinar cell
4
1
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