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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
249
ChIP-seq
Assay category
249
DNA binding
Target of assay
199
histone modification
198
histone
109
broad histone mark
88
narrow histone mark
50
control
47
transcription factor
8
RNA binding protein
3
chromatin remodeller
Date released
249
August, 2017
235
October, 2019
159
November, 2017
149
May, 2021
115
May, 2019
74
April, 2019
59
October, 2018
52
December, 2017
50
May, 2020
35
May, 2024
32
August, 2021
32
September, 2018
27
June, 2019
24
February, 2018
15
October, 2017
12
November, 2019
11
January, 2019
6
November, 2018
6
September, 2017
5
November, 2020
4
December, 2018
3
February, 2021
3
July, 2019
3
March, 2020
Available data
134
bam
134
fastq
124
bigWig
108
bed narrowPeak
85
tagAlign
37
bed broadPeak
30
bigBed narrowPeak
14
bed bed3+
11
bigBed broadPeak
Organism
242
Homo sapiens
Biosample type
153
tissue
51
primary cell
45
in vitro differentiated cells
Organ
87
pancreas
83
connective tissue
44
liver
38
adipose tissue
26
epithelium
22
musculature of body
Project
249
AMP
Genome assembly (visualization)
126
hg19
105
GRCh38
Lab
249
AMP-T2D consortium
Audit category:
16
missing controlled_by
Audit category:
10
inconsistent control read length
3
inconsistent assembly
1
inconsistent control run_type
month_released!
August, 2020
BIOSAMPLE
ASSAY
249 results
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Clear Filters
ChIP-seq
tissue
liver
44
subcutaneous abdominal adipose tissue
36
islet of Langerhans
35
skeletal muscle tissue
22
pancreas
14
+ See 1 more…
primary cell
pancreatic alpha cell
13
pancreatic beta cell
13
skeletal muscle myoblast
13
pancreatic endocrine cell
12
in vitro differentiated cells
adipocyte
45
See all biosamples
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