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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
23
ATAC-seq
9
DNase-seq
Assay category
481
Transcription
153
DNA binding
32
DNA accessibility
7
DNA methylation
1
3D chromatin structure
Date released
10
February, 2023
6
June, 2019
5
February, 2021
3
October, 2019
2
August, 2017
August, 2021
2
November, 2020
1
January, 2018
1
November, 2018
1
November, 2019
1
October, 2017
Available data
16
bigWig
15
bed narrowPeak
14
bam
13
bigBed narrowPeak
12
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
6
bed bed3
4
bed bedgraph
4
fastq
Organism
32
Homo sapiens
Biosample type
16
in vitro differentiated cells
8
primary cell
8
tissue
Organ
173
pancreas
123
epithelium
93
kidney
77
heart
58
vasculature
56
blood vessel
49
artery
44
limb
37
brain
35
musculature of body
32
connective tissue
32
eye
29
liver
18
ureter
12
bone element
12
skeleton
10
lung
9
blood
9
bodily fluid
8
adipose tissue
3
nerve
3
vein
2
spleen
1
pituitary gland
1
skin of body
Project
32
AMP
Genome assembly (visualization)
31
hg19
14
GRCh38
Lab
32
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
month_released!
August, 2021
BIOSAMPLE
ASSAY
32 results
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ATAC-seq
DNase-seq
in vitro differentiated cells
adipocyte
7
1
chondrocyte
5
immature adipocyte
2
preadipocyte
1
primary cell
cardiac fibroblast
3
osteoblast
2
1
brain pericyte
1
hepatic stellate cell
1
tissue
adipose tissue
3
omental fat pad
1
2
adipose tissue(adipose white tissue)
1
subcutaneous adipose tissue
1
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