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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1492
ChIP-seq
1370
total RNA-seq
450
ATAC-seq
257
single cell RNA-seq
207
DNase-seq
86
RNA microarray
78
snATAC-seq
66
WGBS
57
pCHi-C
31
Hi-C
18
small RNA-seq
15
RRBS
10
MeRIP-seq
5
GRO-seq
4
FAIRE-seq
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
Assay category
15
DNA methylation
Date released
15
July, 2019
August, 2017
Available data
15
bed bedMethyl
15
bigBed bedMethyl
Organism
15
Homo sapiens
Biosample type
9
primary cell
6
tissue
Organ
6
epithelium
4
kidney
2
brain
2
heart
2
pancreas
1
connective tissue
1
eye
1
liver
1
musculature of body
1
pericardium
1
vasculature
Project
15
AMP
Genome assembly (visualization)
15
hg19
Lab
15
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
month_released!
August, 2021
August, 2017
BIOSAMPLE
ASSAY
15 results
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RRBS
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 4 more…
tissue
brain
1
heart left ventricle
1
islet of Langerhans
1
kidney
1
pancreas
1
+ See 1 more…
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