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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
ChIP-seq
6
total RNA-seq
Assay category
15
DNA binding
6
Transcription
Target of assay
11
histone
11
histone modification
7
narrow histone mark
4
broad histone mark
3
transcription factor
1
control
Date released
10
February, 2018
9
December, 2017
August, 2021
2
May, 2021
Available data
21
bam
20
bigWig
19
fastq
14
bed narrowPeak
6
tsv
3
bed bed3+
Organism
21
Homo sapiens
Biosample type
21
in vitro differentiated cells
Organ
635
pancreas
566
connective tissue
528
liver
424
adipose tissue
291
epithelium
266
heart
217
brain
191
vasculature
187
blood vessel
141
kidney
128
artery
96
limb
66
bone element
54
blood
54
bodily fluid
53
musculature of body
31
nerve
21
embryo
18
ureter
16
spleen
12
vein
8
skeleton
6
eye
1
pericardium
1
pituitary gland
Project
21
AMP
Genome assembly (visualization)
21
GRCh38
21
hg19
1
hg18
Lab
21
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
Audit category:
3
inconsistent control read length
month_released!
August, 2021
BIOSAMPLE
ASSAY
21 results
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ChIP-seq
total RNA-seq
in vitro differentiated cells
pancreatic endoderm
13
4
Hepatic endoderm
2
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
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