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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
6
single cell RNA-seq
4
ATAC-seq
3
snDrop-seq
1
pCHi-C
Assay category
6
Transcription
4
DNA accessibility
Date released
August, 2021
129
August, 2017
129
February, 2023
122
May, 2021
98
February, 2021
64
October, 2019
58
May, 2020
48
March, 2020
47
September, 2023
42
May, 2022
40
May, 2024
26
July, 2019
25
February, 2020
19
April, 2020
16
January, 2021
15
May, 2023
14
November, 2017
10
November, 2020
8
January, 2018
8
October, 2017
5
December, 2019
5
March, 2023
4
July, 2018
4
March, 2019
2
November, 2019
1
April, 2019
1
August, 2018
1
August, 2022
1
December, 2018
1
November, 2018
1
October, 2022
1
September, 2018
Available data
bam
553
tsv
551
bigWig
89
txt
23
bed narrowPeak
8
tagAlign
6
csv
4
bed bedgraph
2
bed bed3
2
bed bed3+
Organism
98
Homo sapiens
Biosample type
93
tissue
4
in vitro differentiated cells
1
cell line
Organ
84
bone element
8
kidney
4
connective tissue
2
liver
Project
98
AMP
Genome assembly (visualization)
5
hg19
Lab
98
AMP-T2D consortium
Klaus Kaestner, Upenn
Audit category:
84
inconsistent ontology term
5
audit script error
month_released!
August, 2021
files.file_type!
bam
lab.title!
Klaus Kaestner, Upenn
BIOSAMPLE
ASSAY
98 results
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RNA microarray
single cell RNA-seq
ATAC-seq
snDrop-seq
pCHi-C
tissue
bone element
84
kidney
5
kidney (Cortex-Medulla)
1
kidney (cortex)
1
kidney (medulla)
1
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in vitro differentiated cells
adipocyte
4
cell line
HepG2
1
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