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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
227
total RNA-seq
186
ChIP-seq
144
single cell RNA-seq
47
WGBS
17
pCHi-C
5
Hi-C
5
MeRIP-seq
3
CRISPR genome editing followed by DNA sequencing
2
HiChIP
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
shRNA RNA-seq
1
siRNA RNA-seq
Target of assay
control
5
nucleotide modification
Date released
5
November, 2020
Organism
5
Homo sapiens
Biosample type
3
cell line
2
tissue
Organ
5
pancreas
3
epithelium
Project
5
AMP
Lab
5
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
3
inconsistent ontology term
month_released!
August, 2021
lab.title!
AMP-T2D consortium
assay_slims!
DNA accessibility
target.investigated_as!
control
BIOSAMPLE
ASSAY
5 results
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MeRIP-seq
cell line
EndoC_BH1
3
tissue
islet of Langerhans
2