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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
ChIP-seq
8
ATAC-seq
5
total RNA-seq
Assay category
17
DNA binding
8
DNA accessibility
5
Transcription
Target of assay
20
histone
histone modification
12
transcription factor
10
broad histone mark
10
narrow histone mark
5
RNA binding protein
5
control
Date released
27
May, 2021
August, 2021
3
February, 2023
Available data
8
bigWig
3
bed bedgraph
3
txt
2
bed narrowPeak
Organism
30
Homo sapiens
Biosample type
450
primary cell
187
tissue
30
in vitro differentiated cells
13
cell line
2
stem cell
Project
30
AMP
Genome assembly (visualization)
8
hg19
Lab
AMP-T2D consortium
27
Kyle Gaulton, UCSD
3
Struan F.A. Grant, CHOP
Audit category:
1
inconsistent ontology term
month_released!
August, 2021
lab.title!
AMP-T2D consortium
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
30 results
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ChIP-seq
ATAC-seq
total RNA-seq
in vitro differentiated cells
embryonic stem cell
17
6
5
Progenitor cell of Hypothalamus (neural progenitor cell)
1
neuron cell of Hypothalamus (neuron)
1
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