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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
154
ChIP-seq
40
ATAC-seq
Assay category
154
DNA binding
40
DNA accessibility
Target of assay
149
histone
149
histone modification
84
broad histone mark
65
narrow histone mark
5
RNA binding protein
5
transcription factor
Date released
114
May, 2021
August, 2021
40
May, 2024
38
May, 2022
2
February, 2023
Available data
294
bigWig
205
bam
195
fastq
194
bed narrowPeak
153
zippedFastqFolder
102
tsv
84
tagAlign
9
txt
5
hic
3
bed bedgraph
3
bedpe bed3+
3
cool
2
bed bed3+
2
bed broadPeak
1
bedpe
Organism
194
Homo sapiens
Biosample type
114
primary cell
78
tissue
2
in vitro differentiated cells
Organ
40
heart
20
liver
18
pancreas
Project
110
AMP
84
T1D
Genome assembly (visualization)
154
hg19
124
GRCh38
Lab
AMP-T2D consortium
132
Kyle Gaulton, UCSD
40
Patrick T. Ellinor, Broad
20
Karen Mohlke, UNC
2
Struan F.A. Grant, CHOP
Audit category:
1
inconsistent ontology term
month_released!
August, 2021
lab.title!
AMP-T2D consortium
BIOSAMPLE
ASSAY
194 results
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Clear Filters
ChIP-seq
ATAC-seq
primary cell
monocyte
84
CD8-positive, alpha-beta T cell
30
tissue
left cardiac atrium
40
liver
20
islet of Langerhans
18
in vitro differentiated cells
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
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