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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
173
ChIP-seq
26
ATAC-seq
20
total RNA-seq
2
Hi-C
Assay category
173
DNA binding
26
DNA accessibility
20
Transcription
2
3D chromatin structure
Target of assay
137
histone
137
histone modification
84
broad histone mark
53
narrow histone mark
25
control
11
RNA binding protein
11
transcription factor
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
179
bam
174
bed narrowPeak
168
bigWig
97
bigBed narrowPeak
20
tsv
2
bedpe bed3+
2
hic
Organism
221
Homo sapiens
Biosample type
195
tissue
16
cell line
5
in vitro differentiated cells
5
primary cell
Organ
61
heart
57
pancreas
50
blood vessel
50
vasculature
28
brain
21
epithelium
7
limb
7
musculature of body
5
artery
5
kidney
1
adipose tissue
1
connective tissue
Project
221
AMP
Genome assembly (visualization)
193
GRCh38
156
hg19
Lab
181
AMP-T2D consortium
40
Patrick T. Ellinor, Broad
Audit category:
25
inconsistent ontology term
month_released!
August, 2021
November, 2020
BIOSAMPLE
ASSAY
221 results
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Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
Hi-C
tissue
left cardiac atrium
40
islet of Langerhans
19
19
1
ascending aorta
16
thoracic aorta
16
temporal lobe
15
+ See 9 more…
cell line
EndoC_BH1
13
1
1
1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
primary cell
kidney epithelial cell
5
See all biosamples
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