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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
Hi-C
Assay category
14
3D chromatin structure
Date released
9
March, 2020
4
October, 2019
August, 2021
1
March, 2023
Available data
2212
bam
2074
bigWig
1484
bed narrowPeak
941
bigBed narrowPeak
843
fastq
660
tsv
347
tagAlign
298
bed broadPeak
276
bigBed broadPeak
233
bed bed3+
98
txt
73
zippedFastqFolder
28
bed bedMethyl
28
bigBed bedMethyl
14
bedpe bed3+
14
hic
12
bed bed3
8
csv
7
bed bedgraph
4
hdf5
4
tar
2
ibed
1
tagAlign bed3+
Organism
14
Homo sapiens
Biosample type
7
tissue
4
in vitro differentiated cells
3
primary cell
Organ
pancreas
6
epithelium
3
blood vessel
3
heart
3
vasculature
2
musculature of body
2
vein
1
liver
Project
13
AMP
1
ITG
Genome assembly (visualization)
13
hg19
1
GRCh38
Lab
13
AMP-T2D consortium
1
ITG
Audit category:
4
inconsistent ontology term
1
audit script error
month_released!
August, 2021
organ_slims!
adipose tissue
pancreas
BIOSAMPLE
ASSAY
14 results
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Hi-C
tissue
psoas muscle
2
aorta
1
heart
1
heart left ventricle
1
heart right ventricle
1
+ See 1 more…
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
cardiac precursors (cardiac muscle cell)
1
lymphocyte of B lineage (iPSC)
1
primary cell
endothelial cell of umbilical vein
2
chondrocytes
1
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