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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
37
ATAC-seq
28
ChIP-seq
4
DNase-seq
2
total RNA-seq
Assay category
41
DNA accessibility
28
DNA binding
2
Transcription
Target of assay
20
histone
20
histone modification
14
broad histone mark
7
control
6
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
35
February, 2023
26
October, 2019
5
May, 2019
August, 2021
2
February, 2020
2
June, 2019
1
July, 2019
Available data
62
bed narrowPeak
34
bam
27
bigWig
25
bigBed narrowPeak
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
2
tsv
Organism
71
Homo sapiens
Biosample type
71
tissue
66
cell line
2
primary cell
Organ
546
connective tissue
503
pancreas
487
adipose tissue
361
liver
265
brain
181
heart
171
kidney
158
bone element
127
blood vessel
127
vasculature
122
limb
82
musculature of body
71
artery
56
eye
43
nerve
25
spleen
20
lung
18
ureter
16
skeleton
15
epithelium
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
esophagus
1
large intestine
1
lymph node
1
pericardium
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
71
AMP
Genome assembly (visualization)
62
GRCh38
27
hg19
Lab
71
AMP-T2D consortium
month_released!
August, 2021
BIOSAMPLE
ASSAY
71 results
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ATAC-seq
ChIP-seq
DNase-seq
total RNA-seq
tissue
coronary artery
36
5
2
1
tibial artery
1
23
2
1
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