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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
34
ChIP-seq
Assay category
34
DNA binding
Target of assay
350
transcription factor
89
recombinant protein
79
control
64
RNA binding protein
34
histone
34
histone modification
30
chromatin remodeller
18
broad histone mark
16
narrow histone mark
3
nucleotide modification
2
other context
2
other post-translational modification
Date released
15
November, 2017
10
November, 2019
7
October, 2019
August, 2021
1
January, 2019
March, 2020
1
May, 2021
Available data
34
bam
33
bigWig
31
bed narrowPeak
20
bigBed narrowPeak
16
fastq
14
bed broadPeak
14
bigBed broadPeak
11
tagAlign
Organism
34
Homo sapiens
Biosample type
625
tissue
234
primary cell
98
in vitro differentiated cells
34
cell line
2
stem cell
Organ
18
pancreas
15
liver
11
epithelium
1
blood
1
bodily fluid
Project
33
AMP
1
T1D
Genome assembly (visualization)
33
hg19
31
GRCh38
Lab
34
AMP-T2D consortium
Audit category:
11
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
11
inconsistent control read length
month_released!
August, 2021
March, 2020
BIOSAMPLE
ASSAY
34 results
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ChIP-seq
cell line
HepG2
15
EndoC_BH1
11
Panc1
7
GM12878
1
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