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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
305
ChIP-seq
Assay category
305
DNA binding
Target of assay
305
histone
305
histone modification
165
narrow histone mark
140
broad histone mark
60
control
9
transcription factor
Date released
85
May, 2021
74
August, 2017
67
November, 2017
40
October, 2019
27
May, 2020
August, 2021
12
October, 2017
Available data
849
bigWig
831
bed narrowPeak
768
bam
391
bigBed narrowPeak
305
tagAlign
229
fastq
65
bed broadPeak
30
bigBed broadPeak
22
bed bed3+
1
tagAlign bed3+
Organism
299
Homo sapiens
Biosample type
186
tissue
95
primary cell
13
in vitro differentiated cells
11
cell line
Organ
99
brain
55
liver
19
connective tissue
15
pancreas
13
musculature of body
7
adipose tissue
1
epithelium
1
pituitary gland
Project
221
AMP
84
T1D
Genome assembly (visualization)
221
GRCh38
212
hg19
Lab
221
AMP-T2D consortium
84
Kyle Gaulton, UCSD
Audit category:
4
missing controlled_by
Audit category:
11
inconsistent control read length
2
inconsistent assembly
month_released!
August, 2021
BIOSAMPLE
ASSAY
305 results
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Clear Filters
ChIP-seq
tissue
liver
44
substantia nigra
14
caudate nucleus
13
layer of hippocampus
13
skeletal muscle tissue
13
+ See 43 more…
primary cell
monocyte
84
skeletal muscle myoblast
11
in vitro differentiated cells
adipocyte
12
pancreatic PP cell
1
cell line
HepG2
11
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