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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
98
ChIP-seq
Assay category
98
DNA binding
Target of assay
98
histone
98
histone modification
49
broad histone mark
49
transcription factor
48
narrow histone mark
30
control
11
RNA binding protein
3
chromatin remodeller
Date released
37
August, 2017
24
December, 2017
21
May, 2021
16
February, 2018
August, 2021
Available data
66
bam
65
bed narrowPeak
65
bigWig
65
fastq
13
tagAlign
12
bigBed narrowPeak
8
bed bed3+
Organism
98
Homo sapiens
Biosample type
593
tissue
234
primary cell
98
in vitro differentiated cells
35
cell line
2
stem cell
Organ
37
connective tissue
15
epithelium
12
embryo
12
liver
1
pancreas
Project
98
AMP
Genome assembly (visualization)
65
GRCh38
65
hg19
Lab
78
AMP-T2D consortium
20
Kyle Gaulton, UCSD
Audit category:
2
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
7
inconsistent control read length
month_released!
August, 2021
BIOSAMPLE
ASSAY
98 results
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ChIP-seq
in vitro differentiated cells
adipocyte
37
embryonic stem cell
22
hepatocyte
12
pancreatic endoderm
10
definitive endodermal cell
4
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