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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
2
pCHi-C
1
Hi-C
Assay category
1
3D chromatin structure
Date released
2
March, 2020
1
March, 2019
Available data
3003
bam
2819
bigWig
1586
tsv
1325
bed narrowPeak
1256
fastq
801
bigBed narrowPeak
398
tagAlign
157
txt
114
bed broadPeak
93
zippedFastqFolder
79
bigBed broadPeak
64
bed bed3+
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
8
csv
5
hdf5
3
cool
3
tar
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
3
Homo sapiens
Biosample type
2
in vitro differentiated cells
1
tissue
Organ
1
pancreas
Project
3
AMP
Genome assembly (visualization)
3
hg19
Lab
2
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
2
inconsistent ontology term
month_released!
August, 2022
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
3 results
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pCHi-C
Hi-C
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
1
lymphocyte of B lineage (iPSC)
1
tissue
islet of Langerhans
1
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