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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
ChIP-seq
Assay category
8
DNA binding
Target of assay
16
histone
16
histone modification
15
transcription factor
11
chromatin remodeller
8
broad histone mark
8
narrow histone mark
6
RNA binding protein
1
recombinant protein
Date released
4
November, 2017
3
August, 2017
1
October, 2018
Available data
16
bam
16
bigWig
16
fastq
15
bed narrowPeak
8
bigBed narrowPeak
5
bed broadPeak
5
bigBed broadPeak
5
tagAlign
1
bed bed3+
Organism
8
Homo sapiens
Biosample type
4
cell line
3
tissue
1
primary cell
Organ
5
liver
2
pancreas
Project
8
AMP
Genome assembly (visualization)
8
GRCh38
8
hg19
Lab
8
AMP-T2D consortium
Audit category:
8
inconsistent control read length
1
inconsistent assembly
1
inconsistent control run_type
month_released!
August, 2022
BIOSAMPLE
ASSAY
8 results
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ChIP-seq
cell line
HepG2
4
tissue
body of pancreas
1
liver
1
pancreas
1
primary cell
skeletal muscle myoblast
1
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