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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
619
total RNA-seq
124
single cell RNA-seq
98
ATAC-seq
85
RNA microarray
51
ChIP-seq
33
snATAC-seq
6
WGBS
5
STARR-seq
4
Capture-C
3
Hi-C
3
snDrop-seq
2
pCHi-C
1
whole genome sequencing assay
Assay category
51
DNA binding
Target of assay
20
histone
20
histone modification
16
transcription factor
15
control
11
narrow histone mark
9
broad histone mark
1
RNA binding protein
Date released
406
November, 2017
296
August, 2017
242
October, 2019
165
May, 2021
120
May, 2019
94
December, 2017
80
April, 2019
74
October, 2018
70
November, 2018
50
May, 2020
43
August, 2021
40
May, 2024
34
December, 2018
32
September, 2018
31
June, 2019
25
January, 2019
24
February, 2018
15
October, 2017
13
November, 2019
8
February, 2021
6
September, 2017
3
March, 2020
Available data
35
bed narrowPeak
35
bigWig
32
bam
32
tagAlign
3
bed bed3+
Organism
51
Homo sapiens
Biosample type
26
cell line
21
in vitro differentiated cells
4
primary cell
Organ
22
liver
6
artery
6
blood vessel
6
heart
6
vasculature
4
epithelium
Project
51
AMP
Genome assembly (visualization)
34
hg19
21
GRCh38
Lab
33
AMP-T2D consortium
18
Bing Ren, UCSD
month_released!
August, 2022
BIOSAMPLE
ASSAY
51 results
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ChIP-seq
cell line
HepG2
18
smooth muscle cell of the coronary artery
6
iPSC derived cell line
2
in vitro differentiated cells
neural progenitor cell
21
primary cell
hepatocyte
4
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