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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
545
total RNA-seq
84
RNA microarray
78
ChIP-seq
27
snATAC-seq
22
ATAC-seq
19
single cell RNA-seq
13
WGBS
9
DNase-seq
3
snDrop-seq
2
pCHi-C
1
FAIRE-seq
Assay category
78
DNA binding
Target of assay
69
transcription factor
21
RNA binding protein
16
recombinant protein
9
control
7
chromatin remodeller
3
other context
3
other post-translational modification
Date released
406
November, 2017
296
August, 2017
242
October, 2019
165
May, 2021
120
May, 2019
94
December, 2017
80
April, 2019
74
October, 2018
70
November, 2018
50
May, 2020
43
August, 2021
40
May, 2024
34
December, 2018
32
September, 2018
31
June, 2019
25
January, 2019
24
February, 2018
15
October, 2017
13
November, 2019
8
February, 2021
6
September, 2017
3
March, 2020
Available data
78
bam
70
fastq
68
bed narrowPeak
68
bigWig
63
bigBed narrowPeak
8
tagAlign
Organism
78
Homo sapiens
Biosample type
68
cell line
10
tissue
Organ
49
liver
15
blood
15
bodily fluid
6
artery
6
blood vessel
6
heart
6
spleen
6
vasculature
Project
78
AMP
Genome assembly (visualization)
68
GRCh38
66
hg19
Lab
78
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
month_released!
August, 2022
BIOSAMPLE
ASSAY
78 results
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Clear Filters
ChIP-seq
cell line
HepG2
45
GM12878
15
smooth muscle cell of the coronary artery
6
iPSC derived cell line
2
tissue
spleen
6
liver
4
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