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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
35
ChIP-seq
6
total RNA-seq
2
DNase-seq
1
ATAC-seq
1
RRBS
Assay category
35
DNA binding
6
Transcription
3
DNA accessibility
1
DNA methylation
Target of assay
24
histone
24
histone modification
16
broad histone mark
11
control
8
narrow histone mark
Date released
42
October, 2019
2
July, 2019
1
February, 2020
Available data
43
bam
32
bigWig
27
bed narrowPeak
26
bigBed narrowPeak
6
tsv
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
45
Homo sapiens
Biosample type
44
tissue
1
primary cell
Organ
945
pancreas
791
liver
684
connective tissue
524
epithelium
491
adipose tissue
354
kidney
353
heart
286
brain
236
vasculature
230
blood vessel
159
bone element
141
artery
122
limb
96
musculature of body
69
blood
69
bodily fluid
61
eye
43
nerve
37
embryo
25
spleen
22
vein
20
lung
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
45
AMP
Genome assembly (visualization)
33
hg19
32
GRCh38
Lab
45
AMP-T2D consortium
month_released!
August, 2022
BIOSAMPLE
ASSAY
45 results
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ChIP-seq
total RNA-seq
DNase-seq
ATAC-seq
RRBS
tissue
tibial nerve
35
5
2
1
pericardium
1
primary cell
pericardium fibroblast
1
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