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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
67
ChIP-seq
Assay category
67
DNA binding
Target of assay
35
transcription factor
32
histone
32
histone modification
17
narrow histone mark
15
broad histone mark
6
chromatin remodeller
3
RNA binding protein
1
recombinant protein
Date released
39
August, 2017
11
September, 2018
10
November, 2017
4
October, 2017
3
November, 2018
December, 2017
Available data
67
fastq
66
bam
65
bigWig
27
bed narrowPeak
15
bigBed narrowPeak
14
bed bed3+
4
tagAlign
2
bed broadPeak
Organism
67
Homo sapiens
Biosample type
26
tissue
23
primary cell
13
cell line
5
in vitro differentiated cells
Organ
54
pancreas
epithelium
17
connective tissue
13
liver
12
adipose tissue
4
brain
Project
67
AMP
Genome assembly (visualization)
65
hg19
58
GRCh38
Lab
67
AMP-T2D consortium
Audit category:
67
missing controlled_by
Audit category:
6
inconsistent control run_type
5
inconsistent control read length
month_released!
December, 2017
organ_slims!
epithelium
BIOSAMPLE
ASSAY
67 results
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Clear Filters
ChIP-seq
tissue
white adipose tissue
12
islet of Langerhans
10
brain
4
primary cell
pancreatic endocrine cell
23
cell line
HepG2
13
in vitro differentiated cells
adipocyte
5
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