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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
38
ChIP-seq
Assay category
38
DNA binding
Target of assay
88
histone
88
histone modification
45
broad histone mark
42
narrow histone mark
38
transcription factor
29
control
9
RNA binding protein
2
chromatin remodeller
Date released
22
August, 2017
16
May, 2021
December, 2017
Available data
26
bam
26
bigWig
22
fastq
21
bed narrowPeak
6
bed bed3+
4
tagAlign
Organism
38
Homo sapiens
Biosample type
361
cell line
58
tissue
38
in vitro differentiated cells
10
primary cell
Organ
22
connective tissue
1
epithelium
1
pancreas
Project
38
AMP
Genome assembly (visualization)
26
GRCh38
26
hg19
Lab
26
AMP-T2D consortium
12
Kyle Gaulton, UCSD
Audit category:
3
inconsistent ontology term
Audit category:
5
missing controlled_by
Audit category:
6
inconsistent control read length
month_released!
December, 2017
BIOSAMPLE
ASSAY
38 results
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ChIP-seq
in vitro differentiated cells
adipocyte
22
embryonic stem cell
12
cardiomyocytes
3
pancreatic PP cell
1
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