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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
587
ChIP-seq
Assay category
587
DNA binding
Target of assay
588
histone modification
587
histone
307
narrow histone mark
280
broad histone mark
175
control
58
transcription factor
21
RNA binding protein
3
other context
3
other post-translational modification
2
nucleotide modification
Date released
168
October, 2019
123
August, 2017
89
May, 2019
70
November, 2017
60
April, 2019
30
October, 2018
27
May, 2020
12
October, 2017
6
January, 2019
December, 2017
2
March, 2020
Available data
481
bigWig
479
bed narrowPeak
460
bam
307
bigBed narrowPeak
186
tagAlign
68
fastq
35
bed broadPeak
12
bed bed3+
1
tagAlign bed3+
Organism
581
Homo sapiens
Biosample type
587
tissue
237
primary cell
88
in vitro differentiated cells
38
cell line
Organ
184
brain
73
pancreas
64
liver
60
heart
54
blood vessel
54
vasculature
49
limb
33
connective tissue
32
adipose tissue
25
musculature of body
24
nerve
20
artery
20
kidney
6
spleen
4
gonad
4
ovary
2
eye
1
lymph node
1
pituitary gland
Project
585
AMP
2
T1D
Genome assembly (visualization)
453
GRCh38
432
hg19
Lab
587
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
8
missing controlled_by
Audit category:
6
inconsistent control read length
1
inconsistent assembly
month_released!
December, 2017
BIOSAMPLE
ASSAY
587 results
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Clear Filters
ChIP-seq
tissue
liver
64
islet of Langerhans
51
subcutaneous abdominal adipose tissue
31
heart left ventricle
24
tibial nerve
24
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