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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
ChIP-seq
Assay category
14
DNA binding
Target of assay
8
histone
8
histone modification
6
narrow histone mark
6
transcription factor
2
broad histone mark
2
chromatin remodeller
Date released
December, 2017
10
August, 2017
2
February, 2018
2
November, 2017
Available data
45
bam
45
bigWig
45
fastq
43
bed narrowPeak
bigBed narrowPeak
13
bed broadPeak
13
bigBed broadPeak
11
tagAlign
4
bed bed3+
Organism
14
Homo sapiens
Biosample type
8
in vitro differentiated cells
4
primary cell
2
cell line
Organ
6
connective tissue
4
epithelium
4
pancreas
2
liver
Project
14
AMP
Genome assembly (visualization)
14
hg19
12
GRCh38
Lab
14
AMP-T2D consortium
Audit category:
14
inconsistent control read length
1
inconsistent assembly
month_released!
December, 2017
files.file_type!
bigBed narrowPeak
assay_title!
WGBS
BIOSAMPLE
ASSAY
14 results
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ChIP-seq
in vitro differentiated cells
adipocyte
6
definitive endodermal cell
2
primary cell
pancreatic alpha cell
2
pancreatic beta cell
2
cell line
HepG2
2
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