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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
Hi-C
Assay category
1851
Transcription
1675
DNA binding
774
DNA accessibility
94
DNA methylation
9
3D chromatin structure
1
DNA sequencing
Date released
6
July, 2019
1
August, 2021
1
December, 2018
1
October, 2019
Available data
hic
18
bedpe bed3+
3
bed bed3+
3
bigWig
3
cool
3
hdf5
1
bedpe
1
fastq
Organism
9
Homo sapiens
Biosample type
5
tissue
2
cell line
2
primary cell
Organ
4
limb
4
musculature of body
3
brain
2
blood vessel
2
epithelium
2
liver
2
pancreas
vasculature
1
connective tissue
Project
9
AMP
Genome assembly (visualization)
3
hg19
1
GRCh38
Lab
8
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
1
inconsistent assembly
month_released!
December, 2017
files.file_type!
hic
organ_slims!
vasculature
BIOSAMPLE
ASSAY
9 results
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Hi-C
tissue
gastrocnemius medialis
4
islet of Langerhans
1
cell line
HepG2
1
Panc1
1
primary cell
astrocyte of the cerebellum
1
brain pericyte
1
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