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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
total RNA-seq
3
ChIP-seq
1
GRO-seq
Assay category
14
Transcription
3
DNA binding
Target of assay
6
histone
histone modification
3
broad histone mark
3
control
3
narrow histone mark
Date released
8
August, 2021
December, 2017
7
February, 2018
2
May, 2021
1
January, 2018
Available data
17
bam
15
bigWig
14
tsv
8
fastq
Organism
18
Homo sapiens
Biosample type
10
in vitro differentiated cells
8
cell line
Organ
791
pancreas
614
liver
606
connective tissue
459
adipose tissue
426
epithelium
322
kidney
296
heart
165
vasculature
160
blood vessel
159
bone element
121
artery
99
brain
73
limb
68
blood
68
bodily fluid
63
musculature of body
58
eye
20
lung
19
nerve
19
spleen
18
embryo
18
ureter
16
skeleton
7
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
18
AMP
Genome assembly (visualization)
14
GRCh38
14
hg19
1
hg18
Lab
18
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
month_released!
December, 2017
lab.title!
Bing Ren, UCSD
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
18 results
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Clear Filters
total RNA-seq
ChIP-seq
GRO-seq
in vitro differentiated cells
pancreatic endoderm
4
3
1
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
cell line
H1-hESC
8
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