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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
total RNA-seq
9
ChIP-seq
1
GRO-seq
Assay category
14
Transcription
9
DNA binding
Target of assay
6
histone
6
histone modification
3
broad histone mark
3
control
3
narrow histone mark
Date released
December, 2017
13
February, 2018
8
August, 2021
2
May, 2021
1
January, 2018
Available data
23
bam
21
bigWig
14
fastq
14
tsv
6
bed narrowPeak
Organism
24
Homo sapiens
Biosample type
16
in vitro differentiated cells
8
cell line
Organ
927
pancreas
728
liver
684
connective tissue
491
adipose tissue
486
epithelium
393
heart
354
kidney
brain
236
vasculature
230
blood vessel
159
bone element
141
artery
122
limb
96
musculature of body
69
blood
69
bodily fluid
61
eye
43
nerve
25
spleen
24
embryo
22
vein
20
lung
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
24
AMP
Genome assembly (visualization)
20
GRCh38
20
hg19
1
hg18
Lab
24
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
month_released!
December, 2017
September, 2020
organ_slims!
brain
BIOSAMPLE
ASSAY
24 results
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Clear Filters
total RNA-seq
ChIP-seq
GRO-seq
in vitro differentiated cells
pancreatic endoderm
4
9
1
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
cell line
H1-hESC
8
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