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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
ChIP-seq
Assay category
54
DNA binding
Target of assay
305
transcription factor
95
control
86
histone modification
85
histone
82
recombinant protein
54
RNA binding protein
53
narrow histone mark
32
broad histone mark
20
chromatin remodeller
2
other context
2
other post-translational modification
Date released
34
November, 2017
19
November, 2018
December, 2017
1
August, 2021
Available data
53
bam
53
fastq
52
bed narrowPeak
52
bigWig
51
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
1
tar
Organism
54
Homo sapiens
Biosample type
54
cell line
Organ
54
liver
10
blood
10
bodily fluid
10
connective tissue
9
pancreas
6
epithelium
6
heart
5
adipose tissue
5
vasculature
4
blood vessel
3
brain
3
kidney
1
artery
1
eye
Project
54
AMP
Genome assembly (visualization)
51
hg19
47
GRCh38
Lab
53
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
2
missing controlled_by
Audit category:
6
inconsistent control read length
3
inconsistent control run_type
month_released!
December, 2017
BIOSAMPLE
ASSAY
54 results
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ChIP-seq
cell line
HepG2
54
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