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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
374
ChIP-seq
Assay category
374
DNA binding
Target of assay
374
histone
374
histone modification
372
transcription factor
232
broad histone mark
142
narrow histone mark
89
RNA binding protein
81
recombinant protein
31
chromatin remodeller
5
other context
5
other post-translational modification
Date released
92
May, 2019
73
November, 2017
59
April, 2019
58
October, 2019
30
August, 2017
30
October, 2018
19
June, 2019
December, 2017
7
January, 2019
6
October, 2017
Available data
803
bigWig
785
bed narrowPeak
753
bam
374
bigBed narrowPeak
321
tagAlign
198
fastq
65
bed broadPeak
30
bigBed broadPeak
15
bed bed3+
1
tagAlign bed3+
Organism
368
Homo sapiens
Biosample type
307
tissue
47
primary cell
20
cell line
Organ
91
brain
66
vasculature
65
blood vessel
56
heart
49
pancreas
48
limb
24
nerve
22
kidney
20
artery
18
liver
17
epithelium
14
musculature of body
10
vein
9
connective tissue
6
spleen
1
adipose tissue
1
blood
1
bodily fluid
1
eye
Project
374
AMP
Genome assembly (visualization)
373
GRCh38
322
hg19
Lab
374
AMP-T2D consortium
Audit category:
17
inconsistent ontology term
Audit category:
4
missing controlled_by
Audit category:
16
inconsistent control read length
3
inconsistent assembly
1
inconsistent control run_type
month_released!
December, 2017
BIOSAMPLE
ASSAY
374 results
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Clear Filters
ChIP-seq
tissue
tibial nerve
24
heart left ventricle
23
kidney
18
tibial artery
18
body of pancreas
17
+ See 24 more…
primary cell
skeletal muscle myoblast
12
endothelial cell of umbilical vein
10
skeletal muscle satellite cell
7
mesenchymal stem cell
6
kidney epithelial cell
3
+ See 8 more…
cell line
HepG2
13
Panc1
6
GM12878
1
See all biosamples
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