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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
88
ChIP-seq
Assay category
88
DNA binding
Target of assay
927
histone modification
926
histone
469
narrow histone mark
456
broad histone mark
446
transcription factor
322
control
99
RNA binding protein
88
recombinant protein
20
chromatin remodeller
5
nucleotide modification
5
other context
5
other post-translational modification
Date released
65
November, 2017
16
November, 2018
7
October, 2019
Available data
88
bam
87
bed narrowPeak
87
bigWig
81
fastq
80
bigBed narrowPeak
Organism
88
Homo sapiens
Biosample type
88
cell line
Organ
81
liver
7
kidney
Project
88
AMP
Genome assembly (visualization)
87
GRCh38
84
hg19
Lab
88
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
inconsistent control read length
month_released!
December, 2017
audit.WARNING.category!
inconsistent control read length
BIOSAMPLE
ASSAY
88 results
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ChIP-seq
cell line
HepG2
81
RCC 7860 HIF1a re-expression
3
RCC 7860 HIF2a over-expression
2
RCC 7860 vector
2
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