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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
total RNA-seq
25
ChIP-seq
4
DNase-seq
2
ATAC-seq
Assay category
54
Transcription
25
DNA binding
6
DNA accessibility
Target of assay
20
histone
20
histone modification
14
broad histone mark
6
narrow histone mark
5
transcription factor
1
RNA binding protein
Date released
56
February, 2021
21
October, 2019
3
July, 2019
3
May, 2019
2
June, 2019
Available data
102
bam
85
bigWig
74
bed narrowPeak
58
tsv
25
bigBed narrowPeak
6
tagAlign
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
85
Homo sapiens
Biosample type
56
cell line
27
tissue
2
primary cell
Organ
623
pancreas
622
liver
570
connective tissue
425
adipose tissue
301
epithelium
224
heart
222
brain
155
vasculature
150
blood vessel
131
kidney
91
limb
85
artery
68
musculature of body
58
bone element
31
nerve
29
embryo
28
blood
28
bodily fluid
18
ureter
15
vein
13
spleen
6
eye
1
pericardium
1
pituitary gland
Project
85
AMP
Genome assembly (visualization)
85
GRCh38
85
hg19
Lab
85
AMP-T2D consortium
month_released!
December, 2018
files.file_type!
bedpe bed3+
BIOSAMPLE
ASSAY
85 results
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total RNA-seq
ChIP-seq
DNase-seq
ATAC-seq
cell line
smooth muscle cell of the coronary artery
52
4
tissue
tibial artery
18
2
1
coronary artery
3
2
1
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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