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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
RRBS
17
WGBS
3
ChIP-seq
1
FAIRE-seq
Assay category
34
DNA methylation
3
DNA binding
1
DNA accessibility
Target of assay
3
transcription factor
1
RNA binding protein
Date released
21
July, 2019
7
November, 2018
6
August, 2017
3
November, 2017
1
October, 2019
Available data
3115
bam
2917
bigWig
1584
bed narrowPeak
1574
tsv
1302
fastq
885
bigBed narrowPeak
280
tagAlign
275
bed broadPeak
247
bigBed broadPeak
238
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
34
bed bedMethyl
34
bigBed bedMethyl
23
bedpe bed3+
23
hic
11
bed bed3
8
csv
7
bed bedgraph
4
tar
3
cool
2
hdf5
2
ibed
1
bedpe
1
vcf
Organism
38
Homo sapiens
Biosample type
24
tissue
10
primary cell
4
cell line
Organ
8
heart
7
epithelium
6
liver
6
pancreas
4
kidney
4
musculature of body
3
connective tissue
3
vasculature
2
adipose tissue
2
blood vessel
brain
2
spleen
1
eye
1
limb
1
pericardium
1
vein
Project
38
AMP
Genome assembly (visualization)
21
hg19
17
GRCh38
Lab
38
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
month_released!
December, 2018
organ_slims!
brain
BIOSAMPLE
ASSAY
38 results
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Clear Filters
RRBS
WGBS
ChIP-seq
FAIRE-seq
tissue
heart left ventricle
1
2
pancreas
1
2
adipose tissue
2
body of pancreas
2
heart right ventricle
2
+ See 10 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
endothelial cell of umbilical vein
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 5 more…
cell line
HepG2
1
3
See all biosamples
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