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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
37
ChIP-seq
35
total RNA-seq
26
ATAC-seq
2
Hi-C
Assay category
37
DNA binding
35
Transcription
26
DNA accessibility
2
3D chromatin structure
Target of assay
26
histone
26
histone modification
14
broad histone mark
12
narrow histone mark
10
control
1
RNA binding protein
1
transcription factor
Date released
707
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
200
May, 2022
197
February, 2023
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
98
bam
62
bigWig
53
bed narrowPeak
39
fastq
35
tsv
2
bedpe bed3+
2
hic
Organism
100
Homo sapiens
Biosample type
44
in vitro differentiated cells
40
tissue
16
cell line
Organ
55
pancreas
16
epithelium
13
embryo
1
adipose tissue
1
connective tissue
Project
100
AMP
Genome assembly (visualization)
90
hg19
88
GRCh38
Lab
100
AMP-T2D consortium
Audit category:
22
inconsistent ontology term
Audit category:
2
inconsistent control read length
month_released!
December, 2018
organ_slims!
skeleton
BIOSAMPLE
ASSAY
100 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
Hi-C
in vitro differentiated cells
pancreatic endoderm
9
4
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
definitive endodermal cell
3
2
embryonic stem cell
3
2
endocrine cell
3
2
+ See 3 more…
tissue
islet of Langerhans
19
19
1
adipose tissue(adipose white tissue)
1
cell line
EndoC_BH1
13
1
1
1
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