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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
353
ChIP-seq
Assay category
353
DNA binding
Target of assay
241
transcription factor
88
histone
88
histone modification
71
control
66
recombinant protein
broad histone mark
38
narrow histone mark
36
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
715
February, 2021
353
November, 2017
341
May, 2020
323
May, 2021
310
August, 2021
302
August, 2017
258
October, 2019
210
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
108
July, 2019
88
November, 2018
79
December, 2017
64
March, 2020
62
May, 2019
59
September, 2020
57
October, 2018
56
September, 2018
55
November, 2019
49
April, 2018
47
September, 2023
43
April, 2019
December, 2018
31
February, 2018
26
January, 2019
25
February, 2020
20
May, 2024
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
13
October, 2017
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
346
bam
316
fastq
289
bigWig
268
bed narrowPeak
267
bigBed narrowPeak
60
bed broadPeak
56
bigBed broadPeak
37
tagAlign
tar
Organism
353
Homo sapiens
Biosample type
304
cell line
40
tissue
9
primary cell
Organ
304
liver
49
brain
6
epithelium
6
vasculature
3
blood vessel
Project
353
AMP
Genome assembly (visualization)
268
hg19
235
GRCh38
Lab
353
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
15
inconsistent control read length
4
inconsistent control run_type
month_released!
December, 2018
target.investigated_as!
broad histone mark
files.file_type!
tar
BIOSAMPLE
ASSAY
353 results
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Clear Filters
ChIP-seq
cell line
HepG2
304
tissue
layer of hippocampus
10
caudate nucleus
7
cingulate gyrus
7
middle frontal area 46
7
substantia nigra
7
+ See 1 more…
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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