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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
ChIP-seq
8
snATAC-seq
1
ATAC-seq
Assay category
32
DNA binding
9
DNA accessibility
Target of assay
26
transcription factor
8
RNA binding protein
8
chromatin remodeller
6
control
histone
1
histone modification
1
narrow histone mark
Date released
December, 2018
17
January, 2019
15
November, 2018
8
January, 2021
1
January, 2018
Available data
32
bam
32
fastq
27
bigWig
26
bed narrowPeak
26
bigBed narrowPeak
Organism
41
Homo sapiens
Biosample type
33
cell line
8
primary cell
Organ
795
pancreas
688
liver
606
connective tissue
459
adipose tissue
431
epithelium
324
kidney
291
heart
165
vasculature
160
blood vessel
159
bone element
121
artery
99
brain
73
limb
63
musculature of body
58
eye
41
blood
41
bodily fluid
25
embryo
20
lung
19
nerve
18
ureter
16
skeleton
12
spleen
7
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
33
AMP
8
T1D
Genome assembly (visualization)
27
hg19
26
GRCh38
Lab
33
AMP-T2D consortium
8
Kyle Gaulton, UCSD
month_released!
December, 2018
target.investigated_as!
histone
BIOSAMPLE
ASSAY
41 results
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ChIP-seq
snATAC-seq
ATAC-seq
cell line
GM12878
32
1
primary cell
peripheral blood mononuclear cell
8
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