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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
ChIP-seq
Assay category
16
DNA binding
Target of assay
16
histone
16
histone modification
15
transcription factor
11
chromatin remodeller
8
broad histone mark
8
narrow histone mark
6
RNA binding protein
1
recombinant protein
Date released
9
November, 2017
6
August, 2017
1
October, 2018
Available data
31
bam
31
bigWig
31
fastq
29
bed narrowPeak
16
bigBed narrowPeak
11
bed broadPeak
11
bigBed broadPeak
11
tagAlign
6
bed bed3+
Organism
16
Homo sapiens
Biosample type
9
cell line
6
tissue
1
primary cell
Organ
10
liver
5
pancreas
Project
16
AMP
Genome assembly (visualization)
16
GRCh38
16
hg19
Lab
16
AMP-T2D consortium
Audit category:
16
inconsistent control read length
3
inconsistent assembly
1
inconsistent control run_type
month_released!
December, 2018
BIOSAMPLE
ASSAY
16 results
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ChIP-seq
cell line
HepG2
9
tissue
pancreas
4
body of pancreas
1
liver
1
primary cell
skeletal muscle myoblast
1
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