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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
61
ChIP-seq
10
DNase-seq
4
total RNA-seq
1
ATAC-seq
1
FAIRE-seq
Assay category
61
DNA binding
12
DNA accessibility
4
Transcription
Target of assay
61
transcription factor
21
RNA binding protein
13
recombinant protein
7
chromatin remodeller
3
other context
3
other post-translational modification
Date released
574
February, 2021
316
May, 2021
281
November, 2017
276
August, 2017
260
May, 2020
217
October, 2019
187
June, 2019
164
July, 2018
97
May, 2019
91
July, 2019
77
December, 2017
72
September, 2018
71
November, 2018
65
April, 2019
60
August, 2021
59
November, 2019
49
April, 2018
47
October, 2018
45
February, 2023
39
May, 2022
32
March, 2020
31
February, 2018
30
December, 2018
26
January, 2019
13
October, 2017
7
September, 2017
6
November, 2020
December, 2019
3
August, 2018
3
January, 2018
3
June, 2018
3
March, 2019
3
October, 2022
1
May, 2023
Available data
77
bam
76
bigWig
73
bed narrowPeak
72
bigBed narrowPeak
71
fastq
10
bed bed3+
10
bed broadPeak
10
bigBed broadPeak
4
tsv
Organism
77
Homo sapiens
Biosample type
54
cell line
17
tissue
6
primary cell
Organ
49
liver
12
blood
12
bodily fluid
7
connective tissue
4
spleen
3
pancreas
2
brain
1
adipose tissue
Project
77
AMP
Genome assembly (visualization)
85
GRCh38
77
hg19
Lab
77
AMP-T2D consortium
Audit category:
2
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
month_released!
December, 2019
BIOSAMPLE
ASSAY
77 results
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Clear Filters
ChIP-seq
DNase-seq
total RNA-seq
ATAC-seq
FAIRE-seq
cell line
HepG2
42
GM12878
12
tissue
liver
4
2
spleen
3
1
body of pancreas
2
brain
2
omental fat pad
1
+ See 2 more…
primary cell
osteoblast
1
4
1
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