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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
29
ChIP-seq
7
WGBS
1
single cell RNA-seq
Assay category
29
DNA binding
7
DNA methylation
1
Transcription
Target of assay
27
control
1
histone
1
histone modification
1
narrow histone mark
1
recombinant protein
1
transcription factor
Date released
692
February, 2021
314
May, 2020
269
August, 2017
266
May, 2021
213
August, 2021
168
July, 2018
162
May, 2022
140
February, 2023
123
October, 2019
101
July, 2019
87
November, 2017
61
March, 2020
59
September, 2020
49
April, 2018
47
September, 2023
31
October, 2018
27
September, 2018
25
February, 2020
24
November, 2019
23
February, 2018
23
May, 2019
22
December, 2017
19
April, 2020
16
January, 2021
15
April, 2019
15
May, 2023
15
November, 2018
14
November, 2020
11
October, 2017
December, 2019
9
January, 2019
8
January, 2018
8
June, 2019
7
August, 2020
6
September, 2017
5
December, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
182
fastq
181
bam
152
bigWig
bed narrowPeak
123
bigBed narrowPeak
24
bed bed3+
9
bed broadPeak
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
1
csv
Organism
37
Homo sapiens
Biosample type
21
tissue
9
in vitro differentiated cells
5
cell line
1
primary cell
1
stem cell
Organ
15
liver
5
embryo
5
spleen
4
pancreas
3
blood
3
bodily fluid
3
epithelium
Project
37
AMP
Genome assembly (visualization)
12
GRCh38
5
hg19
Lab
37
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
2
missing controlled_by
month_released!
December, 2019
files.file_type!
bed narrowPeak
bigBed broadPeak
BIOSAMPLE
ASSAY
37 results
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Clear Filters
ChIP-seq
WGBS
single cell RNA-seq
tissue
liver
9
spleen
3
2
right lobe of liver
3
body of pancreas
2
pancreas
2
in vitro differentiated cells
pancreatic endoderm
3
Hepatic endoderm
2
Posterior foregut
1
definitive endodermal cell
1
hepatocyte
1
+ See 1 more…
cell line
GM12878
3
HepG2
1
1
primary cell
pancreatic cell
1
stem cell
hESC
1
See all biosamples
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