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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
total RNA-seq
pCHi-C
3
ChIP-seq
1
ATAC-seq
1
RRBS
Assay category
19
Transcription
3
DNA binding
1
DNA accessibility
1
DNA methylation
Target of assay
2
histone
2
histone modification
2
narrow histone mark
1
control
Date released
17
October, 2019
4
February, 2023
1
February, 2020
1
July, 2019
1
June, 2019
Available data
bed narrowPeak
7
bam
6
bigBed narrowPeak
6
bigWig
5
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
24
Homo sapiens
Biosample type
22
tissue
2
primary cell
Organ
731
pancreas
604
connective tissue
476
adipose tissue
367
epithelium
342
liver
199
heart
166
kidney
150
bone element
102
vasculature
100
blood vessel
81
brain
67
artery
35
musculature of body
30
limb
24
eye
23
embryo
19
lung
16
nerve
15
blood
15
bodily fluid
10
spleen
9
vein
8
skeleton
4
gonad
4
ovary
2
pericardium
1
lymph node
1
pituitary gland
1
skin of body
1
spinal cord
Project
24
AMP
Genome assembly (visualization)
1
hg19
Lab
24
AMP-T2D consortium
month_released!
December, 2019
files.file_type!
bed narrowPeak
assay_title!
pCHi-C
BIOSAMPLE
ASSAY
24 results
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Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
RRBS
tissue
islet of Langerhans
14
2
1
retina
3
pigmented layer of retina
2
primary cell
retinal pigment epithelial cell
1
1
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