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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
40
ChIP-seq
2
pCHi-C
Assay category
40
DNA binding
Target of assay
26
histone
26
histone modification
14
broad histone mark
12
narrow histone mark
10
control
4
transcription factor
Date released
20
August, 2021
14
August, 2017
6
May, 2021
2
March, 2020
Available data
291
bam
259
bigWig
141
fastq
132
bed narrowPeak
129
tsv
40
tagAlign
25
bed bed3+
17
bigBed narrowPeak
7
bed bedgraph
7
bedpe bed3+
5
bed bed3
4
hic
3
txt
2
ibed
1
bed broadPeak
1
bigBed broadPeak
Organism
42
Homo sapiens
Biosample type
238
tissue
100
primary cell
42
in vitro differentiated cells
20
cell line
Organ
14
connective tissue
3
epithelium
3
pancreas
Project
42
AMP
Genome assembly (visualization)
19
hg19
18
GRCh38
Lab
42
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
month_released!
December, 2019
BIOSAMPLE
ASSAY
42 results
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ChIP-seq
pCHi-C
in vitro differentiated cells
neural progenitor cell
20
adipocyte
14
cardiomyocytes
3
pancreatic PP cell
3
cardiomyocytes (cardiac muscle cell)
1
lymphocyte of B lineage (iPSC)
1
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