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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
334
ChIP-seq
20
ATAC-seq
Assay category
334
DNA binding
20
DNA accessibility
Target of assay
240
transcription factor
75
histone
75
histone modification
66
recombinant protein
45
broad histone mark
35
RNA binding protein
30
narrow histone mark
16
control
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
551
February, 2021
334
November, 2017
303
May, 2021
272
August, 2017
260
May, 2020
210
June, 2019
207
October, 2019
164
July, 2018
97
May, 2019
85
July, 2019
80
November, 2018
72
December, 2017
72
September, 2018
65
April, 2019
49
April, 2018
47
August, 2021
47
October, 2018
40
May, 2024
31
February, 2018
31
November, 2019
30
December, 2018
26
January, 2019
20
March, 2020
20
May, 2022
14
October, 2017
8
January, 2018
7
August, 2020
December, 2019
5
November, 2020
5
September, 2017
3
August, 2018
3
February, 2023
3
June, 2018
3
September, 2020
Available data
416
bam
354
bigWig
351
bed narrowPeak
348
fastq
312
bigBed narrowPeak
134
zippedFastqFolder
78
tagAlign
70
bed broadPeak
64
bigBed broadPeak
7
txt
3
tar
1
bed bed3+
Organism
354
Homo sapiens
Biosample type
268
cell line
77
tissue
9
primary cell
Organ
288
liver
66
brain
6
epithelium
6
vasculature
3
blood vessel
Project
354
AMP
Genome assembly (visualization)
301
hg19
279
GRCh38
Lab
334
AMP-T2D consortium
20
Karen Mohlke, UNC
Audit category:
10
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
month_released!
December, 2019
BIOSAMPLE
ASSAY
354 results
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Clear Filters
ChIP-seq
ATAC-seq
cell line
HepG2
268
tissue
liver
20
layer of hippocampus
16
caudate nucleus
12
middle frontal area 46
11
substantia nigra
11
+ See 2 more…
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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